How to install BioEdit on a Mac running Mac OS X
BioEdit is a very popular sequence alignment editor. It was written by Tom Hall and it was made only for Windows. This tutorial will show you how to install BioEdit on a Mac without the use of Parallels Desktop or other virtual desktop software running Windows in the background.
You’ll first need to install Wine.
To install Wine on your Mac, you’ll need an Intel Mac and should follow David Baumgold’s guide on how to install Wine on Mac OS X (check the comments below. Some users have had success while others had some problems). Follow his guide until you finish Part 3 Install Wine using MacPorts. Then return to this page.
Install BioEdit using Wine
To install a BioEdit program, first download the installer file. (http://www.mbio.ncsu.edu/bioedit/bioedit.html). It should end with .exe. Save the BioEdit installer file in your user directory (it should show up on the Places in your Finder, below your Desktop icon, and shows up as a little house icon).
Open Terminal and run the installer through Wine by using this command:
$ wine setup.exe
XQuartz will open (if it isn’t already), and soon you will the installer. Click through it to install the program.
Install Winetricks
To make BioEdit work, you’ll have to do some additional installations. In the Terminal window, type:
$ sudo port install winetricks $ sh winetricks mdac27
The Terminal will open the webpage in your browser. Download the software from the website and put it in /Users/YOURNAME/Library/Caches/winetricks/mdac27
Then on the Terminal window type again:
$ sh winetricks mdac27
Run BioEdit
Now you are ready to launch BioEdit. To run BioEdit, type in Terminal:
$ cd ~/.wine/drive_c/BioEdit $ wine BioEdit.exe
Make an short cut for launching BioEdit (optional)
It would be nicer not having to go to the Terminal everytime you want to use BioEdit. You can make a icon that you can put on your dock in order to launch BioEdit quickly. Go to your Spotlight search at the top right corner and type “AppleScript Editor”. Once the program opens, in the big blank space, copy and paste the following:
tell application "Terminal" do script "/opt/local/bin/wine ~/.wine/drive_c/BioEdit/BioEdit.exe" end tell
Next, press the Compile button at the top of the window. The text should become colored. Try pressing the Run button to run your script and it should open BioEdit successfully. Save your script. You can give it whatever name you’d like, but be sure to select File Format: Application in the save options, and leave Startup Screen unchecked. Open up the Finder, go to where you saved your script/app, and drag that file to your Dock. It should stay there, just like a real application. Now you can click it to launch BioEdit quickly without having to type in the Terminal.
Worked really well!! Thank you very much!
Recomended!!
Thanks for sharing! Worked great for me.
Incredible! Easy to do. Thanks a lot!
What a relief to finally have access to BioEdit again. Thanks so much!
I was really hoping I would get this to work, but I’m running Mac OS X 10.7 (Lion) and it doesn’t seem to work. I get hung up at step 2:install wine using MacPorts. I get the following warnings – any suggestions?
Warning: The Command Line Tools for Xcode don’t appear to be installed; most ports will likely fail to build.
Warning: See http://guide.macports.org/chunked/installing.xcode.html for more information.
—> Computing dependencies for wineError: Unable to execute port: can’t read “build.cmd”: Failed to locate ‘make’ in path: ‘/opt/local/bin:/opt/local/sbin:/bin:/sbin:/usr/bin:/usr/sbin’ or at its MacPorts configuration time location, did you move it?
To report a bug, see
Thanks!
Diana
Hi Diana
I am not sure as I haven’t tried installing it on 10.7… Have you signed up for the free Apple developer account and installed Xcode, the Java development package and x11?
It’s telling you to install Command Line Tools. Find it here by scrolling past the language packages: https://developer.apple.com/downloads/index.action
I encountered this problem in 10.7 and this allowed me to progress.
Hi,
I’ve got the same problem reported by Diana. During Step 2, I got the message below:
Warning: The Command Line Tools for Xcode don’t appear to be installed; most ports will likely fail to build.
Warning: See http://guide.macports.org/chunked/installing.xcode.html for more information.
—> Computing dependencies for wineError: Unable to execute port: can’t read “build.cmd”: Failed to locate ‘make’ in path: ‘/opt/local/bin:/opt/local/sbin:/bin:/sbin:/usr/bin:/usr/sbin’ or at its MacPorts configuration time location, did you move it?
To report a bug, see
I’m using MacOS Lion (10.7), running appropriate versions (i.e, MacOS 10.7) of Apple Xcode, Java Development Package and MacPorts. Do you have any suggestion?
Thanks
Plinio
Hey Plinio,
Thanks for reporting this. For the time being I do not know how to solve this problem. However, if you do manage to figure it out, please share your solution. I don’t have 10.7 on my computer so I am unable to play around with it. I know it’s a temporary fix, but I have changed the title of the article to say that it only works for 10.6 (which is what I have managed to get working for me).
Once Xcode was finished, you need install the command line tools: run Xcode and open the Preferences. Go to the Downloads tab, and install the Command Line Tools. You’re done!
I tried to install BioEdit for 10.5.8. when i enter – $ wine setup.exe command in the terminal (step 3) i get the following: command not found. what am I doing wrong? any suggestions?
Hi Daphne
I’m sorry I am not too sure… Perhaps you were not in the correct directory? But it sounds that it does not know the wine command which it should if it was successfully installed.
Most likely you copied it even with the $ and now you have two there – that gives that error
Hi,
Thanks for posting. I was able to complete every step except for the last one – when I try to open BioEdit, I can see the program begin to open for a second, and then it shuts down suddently, and there’s an error message from my Mac saying “The application X11 quit unexpectedly.”
Any experience with this kind of error?
Thanks so much!
Juliet
Hi Juliet
I have not experienced this kind of error. Maybe you could try to update x11 or reboot your machine.
Hi Juliet,
had the same problems on 10.5.8: update your X11, that should work!
Best
Harald
I should mention that I’m using a Mac OS X 10.5.8. Thanks!! 🙂
Hi there,
I completed till part 4 without any problems but I am stuck in part 5 i.e. Run BioEdit section. When I typed cd ~/.wine/drive_c/BioEdit it says that “No such file or directory” I am wondering to where I should change my working directory. It didn’t find any BioEdit packages in my system …Actually, it’s in the downloaded folder the whole bioedit packages and I didn’t change the location of the downloaded packages. So, to where I should change my working directory to run the BioEdit?
Many Thanks!
Keshav
Hi there,
Sorry for taking so long to answer back. Try moving the installer exe for Bioedit to your user directory (the place with the little home icon) and then install it using wine (see part 3). Once you’ve moved the installer file for BioEdit there, type wine install.exe (where “install.exe” is the installer file name for the BioEdit installer, I can’t remember what it is now).
Awsome it works!
Work great so far! many many thanks.
This is amazing! Thank you so much – a great help. I’m using Lion 10.7.4 and it works perfectly.
I’m glad it worked out for you. Thanks for reporting back that it can work on 10.7!
How to install BioEdit on a Mac running Mac OS X 10.7.5
I want to install BioEdit on my MacBook pro according to your above stated protocol but couldn’t install. I did it successfully up to Part 1 of above said manual and when started the Part 2 that is (Install Wine using MacPorts) but after this step the Terminal gives an error, so I dont know how to resolve this problem.
I request you if some one can help me I will be highly obliged.
Regards,
Waqar
Sorry could you be more specific to the error. Were you able to successfully complete step 2 and install wine through macports at all? Was your error at step 3?
Thank you phylogeneticgeek! It worked on my Macbook PRO OS X 10.8 Mountain Lion! I had to install X11. Had to fix other bugs, like the D-bus where it said “Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded!” on Terminal. I found another site helpful along with this one! Thanks again! Other site that helped me: http://www.davidbaumgold.com/tutorials/wine-mac/
I also want to comment that I was able to install this on my OS X 10.8.2 (Mountain Lion). The link that hersheyfellow gave (http://www.davidbaumgold.com/tutorials/wine-mac/) works really well. But if you want to open BioEdit you should use step 5 of this page. It runs great!
Hi Phylogeneticgeek,
I couldn’t find Java Development Package. I’m using OS X 10.8.2 Could you please help me to this
Many Thanks,
Asanka
I can’t find the fold Users/YOURNAME/Library/Caches/winetricks/mdac27. Anyone can help me ? Just the last step!
Bioedit doesn’t work work on MacBook Air 😦
As others have reported, BioEdit runs just fine on Mountain Lion 10.8.2 if the steps above are followed carefully. Thanks also to hersheyfellow for helping me kill the annoying bug at startup (which didn’t seem to interfere with BioEdit running, but always ‘bugged’ me).
Seems that I spoke too soon, sort of — one of the features of BioEdit I value most highly (i.e., pairwise alignments while allowing ends to slide) appears to be broken now. Attempting such an alignment on 10.8.2 generates the following error, which I didn’t get before: “External exception EEFFACE.” A little Googling around suggests this may be the result of attempting to read/write beyond the bounds of a std::vector in C++ Builder. Runtime exceptions like this go far beyond my debugging abilities. Is anyone else with a 10.8.2 installation able to perform pairwise alignments while allowing ends to slide? I’ve never been able to find other software that allows me to do this, so I’m keen to get this working again.
Moderator, feel free to remove this comment and my previous one about the EEFFACE errors I’ve been getting. While the error is legitimate for the first sequences I tested, it seems to somehow be specific to sequences that I’ve imported. If I create two new sequences from scratch within BioEdit and attempt to align them, things work fine. I’m guessing there must be some pernicious formatting error with my inputs that was causing the problems — it probably has nothing to do with the installation per se.
Last login: Fri Jan 11 12:20:41 on ttys000
NIAZs-MacBook-Air:~ niaz$ sudo port install wine
Error: Port wine not found
NIAZs-MacBook-Air:~ niaz$
I’m stuck here in Part 2 “installing wine using mac ports” it gives me this above command
NIAZs-MacBook-Air:~ niaz$ sudo port install wine
Error: Port wine not found
NIAZs-MacBook-Air:~ niaz$
When I enter command “sudo port install wine” it gives me error saying “Port wine not found”
Can some one help me explain how to install wine. I’m stuck in this step
Thank you very much for the help! I have one remaining “fixme”. BioEdit is running, but if I minimize it kind of disappears from the menu bar.
fixme:ieframe:PersistStreamInit_Load (0x1ed640)->(0x1ecb90)
Each time I minimize the numbers at the end change. And I can get BioEdit back and all functions seem to work. I was just wandering if this last little “glitch” can be solved.
Thank you.
Julie
I apologize for double posting! The fixme:ieframe:PersistStreamInit_Load (0x1ed640)->(0x1ecb90) occurs when I open a file into BioEdit. I just watched to see exactly when it occurred. Are there more winetricks? I have OS 10.8.2.
Hi,
I’ve used this on a previous MAC but can’t seem to get it to function now (Mac 10.7). The command “sh winetricks mdac27” comes back with “no such file or directory”. I think I have winetricks already installed so i tried just going ahead and go to “wine BioEdit.exe” we results in a new X-code window with an error “error creating object. Please verify that the microsoft data …. has been properly installed.” It appears that it’s trying to launch but can’t get that far.
Any suggestions?
Hi, I have a iMac OS X 10.8.2
I colud do up to part 3.
I wrote ‘sudo xcodebuild -license’ and than read and wrote ‘agree’
Terminal have responded ‘You can view the license agreements in Xcode’s About Box, or at /Applications/Xcode.app/Contents/Resources/English.lproj/License.rtf’
I have closed and reopened terminal window
and than I have entered command (sudo port install wine)
terminal responded:
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘sudo’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘xcodebuild’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘if’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘[‘, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘`sysctl’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘hw.cpu64bit_capable`’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘1’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘]’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘;’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘then’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘echo’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘”+universal”‘, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘|’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘sudo’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘tee’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘/opt/local/etc/macports/variants.conf;’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘else’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘echo’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘”not’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ’64bit’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘capable”;’, ignored.
Warning: /opt/local/etc/macports/variants.conf specifies invalid variant syntax ‘fi’, ignored.
Error: Port wine not found
I did not understand
help me?
Hi I am stuck on here.
anybody can help me? I am using mountain lion.
Thanks.
MacBook-Pro:~ apple$ sh winetricks mdac27
Executing w_do_call mdac27
Executing load_mdac27
Using native,builtin override for following DLLs: odbc32 odbccp32 oledb32
Executing winetricks_early_wine regedit C:\windows\Temp\_mdac27\override-dll.reg
Setting Windows version to nt40
Executing winetricks_early_wine regedit C:\windows\Temp\_mdac27\set-winver.reg
Executing wine /Users/apple/Library/Caches/winetricks/mdac27/mdac_typ.exe
Application tried to create a window, but no driver could be loaded.
Make sure that your X server is running and that $DISPLAY is set correctly.
err:systray:initialize_systray Could not create tray window
Application tried to create a window, but no driver could be loaded.
Make sure that your X server is running and that $DISPLAY is set correctly.
——————————————————
Note: command ‘wine /Users/apple/Library/Caches/winetricks/mdac27/mdac_typ.exe’ returned status 43. Aborting.
I solved the problem by myself.
After installing the XQuartz manually, every steps works fine.
Thanks
I cannot thank you enough for this, I love BioEdit and I’m happy to have it back in my life! Perfect instructions, it all went smoothly.
Hi everyone,
during the step 4 I’ve had the following error message from my terminal:
Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded!
wine: cannot find L”C:\\windows\\system32\\setup.exe”
Any guess?
Thanks!
Just wanted to say thank you & this worked.
Hello!, after installing wine I came back to these instructions but when I called the installer trough wine this appeared in the console:
MacBook-Pro-de-Dainiz:~ Dainiz$ wine setup.exe
Fontconfig warning: ignoring UTF-8: not a valid region tag
Application tried to create a window, but no driver could be loaded.
Make sure that your X server is running and that $DISPLAY is set correctly.
err:systray:initialize_systray Could not create tray window
Application tried to create a window, but no driver could be loaded.
Make sure that your X server is running and that $DISPLAY is set correctly.
Could you please help me?
Thanks a lot.
Dainiz Hernández
I get to the part where I should run BioEdit ($ wine BioEdit.exe) and this comes up via XQuartz Terminal:
missing dependency
this product requires Microsoft Internet Explorer 4.01 SP2 or greater. Please exit set up and install the latest Microsoft Internet Explorer.
Any ideas?
Appreciate any guidance 🙂
I figured out my own issue…..when I first installed BioEdit…and the last screen during install came up…where it asks if i want to launch BioEdit (check in the box) or not (unchecking the box)…i unchecked it and closed the installer window.
THIS WAS THE PROBLEM!!!
So…..:)…..What I did was retype the command:
$ wine setup.exe
causing BioEdit to install again. BUT this time i left the box checked (launch program) and followed with the steps that follow as desribed above. And Voila! ALL GOOD 😉
Hi, i have a Macbook Pro OS X 10.8.4
I did all the steps well until i execute the comand “wine setup.exe” the installation window appears but when i did click on continue disappears and the Terminal box shows “fixme:storage:create_storagefile Storage share mode not implemented.”
Please help me
So after a few days of errors and google, I have managed to successfully complete the install. First, the homebrew installation of Wine does not work, others have had the same problem with being stuck in the installer. Uninstall of wine was partially successful [the .wine directory remained and needed to be removed manually], the uninstall of homebrew had some scary comments that the provided script could damage the system. Instead I removed everything from /usr/local that homebrew had installed there. I then reinstalled wine via macports [the alternate page on the site with the homebrew instructions]. then installed winetricks. I then removed the .wine directory as it was returning an error when trying to install the mdac27. Installed mdac27 with winetricks. The ran the setup.exe for BioEdit. I found I needed to do the mdac27 installation first to get the installer to run. Finally I could run BioEdit. I did get a Dynamic session lookup error saying “launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded!” which didn’t seem to affect BioEdit loading, but I corrected it as well. Hope it works well now. So far I have been able to open old alignments and manipulate as previously.
I am having the same issue as Ivan, also Macbook Pro OS X 10.8.4. Installed Wine via Homebrew as per the recommendations on the linked page, and installed winetricks mdac27 using the brew command instead of port. When executing wine setup.exe from the home directory the first few windows appear [initializing installer, etc]. Then the first msi window [the blue and white one] appears and upon selecting next the system stalls. the same fixme: error as above appears often before clicking next. Running WINEDEBUG shows where it stalls and it seems hung up on drawing the next window which would have the license information. Much googling gave no results except those that said a fixme shouldn’t be a catastrophic error.
Any help would be appreciated.
Thank you everyone for coming back to comment whether you were successful or you had problems but eventually figured out the solution.
This is what science/life is all about right? Share what we know so it may help someone else. This is exactly why I started this post in the first place almost 3 years ago.
Unfortunately I have been so incredibly busy with my doctoral studies that I no longer have the time to properly manage this page at a satisfactory level. Hopefully new users will read what you’ve all contributed in the comments section if they are running into problems.
Again, thank you so much for your contributions.
I had success running BioEdit on Mac OS X 10.8.4 by installing it using WineBottler. I remember I had to use the Winetrick for Microsoft Data Access Components 2.8 sp1 (mdac28) to make it run. But it installs very easily and can be packaged as its own Mac OS X application using WineBottler.
This also worked really well with MEGA 5.2. In fact, using the MEGA app created through WineBottler, it runs better than the Mac version from the official website and has a smaller storage footprint.
Sam could you please help us giving an instructions list to do it?
I tried what Sam suggested and here’s some very rough step by step instructions.
1. Download WineBottler here http://winebottler.kronenberg.org/ . Also make sure you have XQuartz installed. http://xquartz.macosforge.org/landing/
2. Open the WineBottlerCombo_1.4.1.6.dmg file and drag Wine and WineBottler apps to your Applications folder.
3. Open WineBottler app
4. Click on the Advanced Tab.
5. Under “Program to Install”, click “Select file…” and then pick the setup.exe for BioEdit. Go to the BioEdit site if you don’t have it http://www.mbio.ncsu.edu/bioedit/bioedit.html. Leave the button on “This is an installer, execute it.”
6. Where it says “Winetricks”, scroll down until you see “mdac28” and click on the box to checkmark it.
7. Where it says “Bundle”, click to check the box for “include wine binaries”
7. On the bottom of the page, click on Install.
8. Some windows will pop up, just click to accept licenses/etc just as you would install these programs under Windows.
9. Once it’s finished, it will create the .app. I called it BioEdit.app.
10. Click BioEdit.app to run it. That seemed to have worked for me.
I canot install winetricks. Once “sudo port install winetricks” command run following massage was displayed. Help
Admins-MacBook-Pro:~ admin$ wine setup.exe
err:winediag:SECUR32_initNTLMSP ntlm_auth was not found or is outdated. Make sure that ntlm_auth >= 3.0.25 is in your path. Usually, you can find it in the winbind package of your distribution.
fixme:iphlpapi:NotifyAddrChange (Handle 0x10ef550, overlapped 0x10ef55c): stub
wine: configuration in ‘/Users/admin/.wine’ has been updated.
fixme:storage:create_storagefile Storage share mode not implemented.
Admins-MacBook-Pro:~ admin$ sudo port install winetricks
Password:
Warning: port definitions are more than two weeks old, consider using selfupdate
—> Extracting zlib
Error: org.macports.extract for port zlib returned: command execution failed
Please see the log file for port zlib for details:
/opt/local/var/macports/logs/_opt_local_var_macports_sources_rsync.macports.org_release_tarballs_ports_archivers_zlib/zlib/main.log
Error: Problem while installing zlib
Error: Unable to execute port: upgrade openssl failed
Admins-MacBook-Pro:~ admin$
Hi all,
installing winestricks is taking to long… more than 2 hours and still running…. is that fine?
Hi David, I have the same problem… did you fix it?
Awesome!! thank you!
Sorry I didn’t get back to you guys – the step-by-step instructions that phylogeneticgeek wrote are what I did as well 🙂
Thank you very much!!!..I successfully installed BioEdit following your tutorial, although having lots of error and trial. I am new to Mac, so had lots of problem and would say that its not easy to install. But few things to add that:
1. Install Wine using MacPorts, another alternative (as from Homebrew it took hardly 10 minutes to install and was not complete).
2. I install Winetricks before BioEdit.
3. After installing Winetricks at command (sh winetricks mdac27), I could not find Library in my User directory, then I learned it is hidden by default in Mac OS x10.8 or newer version. Which I Open by giving command in terminal (chflags nohidden ~/Library/), it will permanently reveal your Library in user directory, but if you want to hide it again for safety purpose, give the command (chflags hidden ~/Library/).
4. After that, as written Xquartz will open, I don’t why, it did not happen in my case. But I proceed further.
5. While installing BioEdit, when I gave command $ wine setup.exe, it showed some error (wine: cannot find L”C:\\windows\\system32\\install.exe”). Instead of pasting whole folder there, I copied all files of BioEdit zip folder one by one in user directory and tried again, which worked.
Then I followed the instruction and it worked without any error. I am highly Thankful to all of you guys, your feedback really helped me a lot to bring BioEdit in my life again.
It would be helpful if someone shares about how to install MEGA programme on Mac.
Just to add information that I installed BioEdit 5.09 version on MacBook Pro OS x 10.8.5.
Whenever I open BioEdit, terminal also open and says:
/opt/local/bin/wine ~/.wine/drive_c/BioEdit/BioEdit.exe
Farzanas-MacBook-Pro:~ fsabir$ /opt/local/bin/wine ~/.wine/drive_c/BioEdit/BioEdit.exe
Dynamic session lookup supported but failed: launchd did not provide a socket path, verify that org.freedesktop.dbus-session.plist is loaded!
err:ntdll:RtlpWaitForCriticalSection section 0x7bc8fc74 “loader.c: loader_section” wait timed out in thread 001c, blocked by 001d, retrying (60 sec)
and then it opens the BioEdit window. I was wondering if it is the normal way of opening BioEdit or am I missing something, although after opening BioEdit works perfect.
OK….now here I have problem…I can not work in two windows of BioEdit. and most importantly I can not do clustal alignment..it says that I have to install Dos box…any suggestions please!!!!
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Can someone help me? I’m a computer programming N00b and I’ve managed to successfully follow the steps up until Wine Tricks. I type in the commands as stated “sudo port install winetricks” but after entering my password I am told “sudo: port: command not found”
Any suggestions?
I also get this message when I run brew doctor: (not sure if it means anything)
Warning: Homebrew’s sbin was not found in your PATH but you have installed
formulae that put executables in /usr/local/sbin.
Consider setting the PATH for example like so
echo export PATH=’/usr/local/sbin:$PATH’ >> ~/.bash_profile
THANKS!!!!
hello, my name is Reynaldo, I am trying to install Bioedit in mac OS X 10.9.4, but I have a hurt time with this. However I get all the step 1, 2 and 3 in installling wine on mac and then I follow thw step on https://phylogeneticgeek.wordpress.com/2011/08/05/how-to-install-bioedit-on-a-mac/ I get the instal bioedit using wine but when I try to install winetrick, I have this problem:
MacBook-Pro-de-MACARENA:BioEdit macarenadelpilarbarrajimenez$ wine setup.exe
fixme:storage:create_storagefile Storage share mode not implemented.
fixme:ntdll:find_reg_tz_info Can’t find matching timezone information in the registry for bias 240, std (d/m/y): 27/04/2014, dlt (d/m/y): 7/09/2014
MacBook-Pro-de-MACARENA:BioEdit macarenadelpilarbarrajimenez$ sudo port install winetricks
Password:
sudo: port: command not found
there are someone who guideme from this step?
Thanks
Wonderful! Steps were easy to follow. Thank you very much 🙂
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Hi! I try to install BioEdit using Wine but in the Terminal appear this message: “fixme:storage:create_storagefile Storage share mode not implementes.”
How can I solve this?
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Hi! I am having problems with installing Winetricks… not sure what I did wrong or what I am missing. Any help would be greatly appreciated… Thank you!
$ sudo port install winetricks
Password:
sudo: port: command not found
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Hello the good people,
After some day and a night of technicalities, Wineskin finally worked for me. I am using OS X Yosemite 10.10.3. I tried everything in detail. But the Homebrew gave me some trouble. When I ran the Brew doctor, I got warning ‘some un-brewed .pc apps were detected’. Also got license errors but this was solved the command ‘$ sudo xcode build -license’. So, I could manage to install wine via Homebrew using the Terminal, and therefore did not make to install the Winetricks and theBioedit.exe with Homebrew via wines. The separate (without using the command line) downloads and installations of the Xcode, the Java, the XQuartz, and the wine+the winebottler the went successfully.
Finally I tried the wineskin application, which I had previously downloaded from the http://wineskin.urgesoftware.com/tiki-index.php. By launching the wineskin, you get a window with “install Software”, “Set screen Options” “Advanced” “Quit”. I clicked on the “Advanced>configurations”, I located and installed a wrapper called “MyCoolWrapper”. By going to “Advanced”>”Tool”>”Winetricks”>”dlls” I selected both the ”mdac27” +”mdac28”. And used the “run” button at the middle right part of the dialogue box. I went back to configurations and browse to locate the bioedit.exe and installed the software successfully. I went back to the configurations and this time round I did the testrun using the button bottom right hand side. And with success the bioedit could open as it does normally in windows. The Goal achieved! Thank you guys for sharing.
Evans
Hello the good people,
After some day and a night of technicalities, Wineskin finally worked for me. I am using OS X Yosemite 10.10.3. I tried everything in detail. But the Homebrew gave me some trouble. When I ran the Brew doctor, I got warning ‘some un-brewed .pc apps were detected’. Also got license errors but this was solved the command ‘$ sudo xcode build -license’. So, I could manage to install wine via Homebrew using the Terminal, and therefore did not make to install the Winetricks and theBioedit.exe with Homebrew via wines. The separate (without using the command line) downloads and installations of the Xcode, the Java, the XQuartz, and the wine+the winebottler the went successfully.
Finally I tried the wineskin application, which I had previously downloaded from the http://wineskin.urgesoftware.com/tiki-index.php. By launching the wineskin, you get a window with “install Software”, “Set screen Options” “Advanced” “Quit”. I clicked on the “Advanced>configurations”, I located and installed a wrapper called “MyCoolWrapper”. By going to “Advanced”>”Tool”>”Winetricks”>”dlls” I selected both the ”mdac27” +”mdac28”. And used the “run” button at the middle right part of the dialogue box. I went to “Install software” button and located the Bioedit.exe while specifying it as a copy of the original Bioedit. It installed successfully. This step must be done for all other windows softwares. I then went back to configurations to locate the bioedit.exe file installed and run the software successfully. For this, clicked the “testrun” button at bottom right hand side. And with success the bioedit could open as it does normally in windows. The Goal achieved! Thank you guys for sharing.
Evans
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fixme:storage:create_storagefile Storage share mode not implemented.
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it works on mac os el capitan?
i try to install but it crash and get paused on installing set up.exe
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Thanks very much for this guide, it’s extremely helpful! I encountered a couple of minor problems when installing on El Capitan 10.11.3, so am posting the adjustments here in case anyone else finds them helpful.
Follow the instructions in the article up to “Install WineTricks”, then type:
# install winetricks
sudo brew install winetricks
# install additional packages
sh winetricks mdac27
# launch BioEdit to check installation success
cd ~/.wine/drive_c/BioEdit
wine BioEdit.exe
Then follow the instructions to make a shortcut for launching Bioedit, but change the content of the script to:
tell application “Terminal”
do script “/usr/local/Cellar/wine/1.8/bin/wine ~/.wine/drive_c/BioEdit/BioEdit.exe”
end tell
Hi… I’ve been trying all the variations of this and cant’ get anywhere. I did install and run BioEdit on a previous machine… But I fear the instructions are out of date. For example, when I try your fixes after line one i get ” Error: Running Homebrew as root is extremely dangerous and no longer supported.
As Homebrew does not drop privileges on installation you would be giving all
build scripts full access to your system.”
I wonder if someone could try updating these instructions?
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Hello, I was successful in every step however, I cannot seem to make the short cut (last step) work. when I Run BioEdit with the previous commands $ cd ~/.wine/drive_c/BioEdit and
$ wine BioEdit.exe it works perfectly. But, when I create the script using script editor this error appears. Nadias-MacBook-Pro:~ NadiaBahadur$ /opt/local/bin/wine ~/.wine/drive_c/BioEdit/BioEdit.exe
-bash: /opt/local/bin/wine: No such file or directory
Could someone please help?
Hi, I did once install this successfully – but since changing laptop it has failed repeatedly. I get a series of different errors at the moment i cannot launch the browser window to get winetricks
Beths-MacBook-Air:BioEdit Beth$ sh winetricks mdac27
——————————————————
wine cmd.exe /c echo ‘%ProgramFiles%’ returned empty string, error message “wine: Call from 0x7b42951e to unimplemented function shell32.dll.SHGetFolderPathW, aborting
wine: Unimplemented function shell32.dll.SHGetFolderPathW called at address 0x7b42951e (thread 000b), starting debugger…
err:module:DelayLoadFailureHook failed to delay load comctl32.dll.InitCommonControlsEx
wine: Call from 0x7b42951e to unimplemented function comctl32.dll.InitCommonControlsEx, aborting”
——————————————————
I did manually install winetricks
and this
Beths-MacBook-Air:BioEdit Beth$ cd ~/.wine/drive_c/BioEdit
ls
does show the programme is present
however it does not launch
eths-MacBook-Air:BioEdit Beth$ wine BioEdit.exe
err:module:attach_process_dlls “gdi32.dll” failed to initialize, aborting
err:module:LdrInitializeThunk Main exe initialization for L”C:\\windows\\system32\\winemenubuilder.exe” failed, status c0000005
err:module:DelayLoadFailureHook failed to delay load shell32.dll.SHGetFolderPathW
wine: Call from 0x7b42951e to unimplemented function shell32.dll.SHGetFolderPathW, aborting
wine: Unimplemented function shell32.dll.SHGetFolderPathW called at address 0x7b42951e (thread 000b), starting debugger…
err:module:DelayLoadFailureHook failed to delay load comctl32.dll.InitCommonControlsEx
wine: Call from 0x7b42951e to unimplemented function comctl32.dll.InitCommonControlsEx, aborting
err:module:attach_process_dlls “gdi32.dll” failed to initialize, aborting
err:module:LdrInitializeThunk Main exe initialization for L”C:\\BioEdit\\BioEdit.exe” failed, status c0000005
And it’s not launched.
If anyone can update the instructions I’d appreciate it.
Does anyone knows how to solve ‘/Users/AnaPaula/.wine’ is a 64-bit installation, it cannot be used with a 32-bit wineserver.”
Cannot go install/run mdac, currently mdac28.
Thanks
Ana Paula
OS Sierra 10.12.5
I am having a combination of issues similar Ana Paula and Alexandre. When I try to run ‘sh winetricks mdac27’, I receive the error:
This package does not work on a 64-bit installation. You must use a prefix made with WINEARCH=win32.
I created 32-bit Wine prefix using some of the tricks found here https://askubuntu.com/questions/514931/trying-to-switch-to-32-bit-wineprefix-from-64-bit-wine-1-6-2-trusty-14-04
When I try to run ‘sh winetricks mdac27’ using the 32-bit prefix, I get the following error:
WINEARCH=win32 WINEPREFIX=/Users/kevingallagher/.wine32 wine sh winetricks mdac27
wine: cannot find L”C:\\windows\\system32\\sh.exe
Anybody make it through these issues?
In case anyone else has this issue, I found a solution based on this article: https://askubuntu.com/questions/177192/how-do-i-create-a-32-bit-wine-prefix (worked for OS X Sierra, even tho this solution was meant for ubuntu)
Specifically, I followed the instructions in the comment by Cristiana Nicolae:
“First I deleted the Wine folder with this command:
rm -r ~/.wine
If it tells you that directory is not empty just add the -f (force) flag. Note that this will remove any windows applications installed in this prefix!
Your command should look something like this:
rm -r -f ~/.wine
And then create a 32 bit prefix with this command:
WINEARCH=win32 WINEPREFIX=~/.wine wine wineboot “
hi, is there an updated version of this article? I achieved the installation thanks to Kevin G’advises, nevertheless, when I minimize the bioedit window, it won’t open anymore like if there was no window… also it doesn’t read .txt files written in fasta any advices?
I have some problems installing bioedit. Anybody has encountered this and have a solution.
Pro:bioedit cgbatbatan$ wine setup.exe
Pro:bioedit cgbatbatan$ 0029:fixme:seh:call_stack_handlers calling personality routine in system library not supported yet
0029:fixme:seh:call_stack_handlers calling personality routine in system library not supported yet
wine: Unhandled page fault on read access to 0x43815a4d at address 0x421bc71a (thread 0029), starting debugger…
0029:err:seh:start_debugger Couldn’t start debugger (“winedbg –auto 32 44”) (1115)
Read the Wine Developers Guide on how to set up winedbg or another debugger
0029:fixme:seh:RtlUnwindEx calling personality routine in system library not supported yet
0029:fixme:seh:RtlUnwindEx calling personality routine in system library not supported yet
any body can suggest me how to locate my seq file (.fasta or.abi etc) through bioedit running under wine. When I choose open menu, it bring me to the strange folders which not commonly appear in mac
BioEdit is compatible with Monterey 12.2.1
thank you
if it is compatible I need the link to install app